PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0041s0104.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 345aa    MW: 37942.2 Da    PI: 5.2227
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0041s0104.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.74.8e-1196167168
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikege 68 
                          +Wt   v +L+ea++e+  ++++g+lk+++Weev+  +    + +   ++ kqCk k   l++ y+ i++++
  Mapoly0041s0104.1.p  96 EWTPAAVIVLLEAYEERLGEVNNGNLKAKDWEEVATLVnrhcQGTRSIVGVKQCKRKVYALRRWYRTIRTRQ 167
                          5***********************************995532333334589***************999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.0E-1095167No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MMETMESLGL GEADDEVRVG SLVAEVREIS MADRIDDGMG SEECLKLWME AEANCDAGRE  60
HRMDGMQMDR LPSADDVGLV ENVMQPQSPV TWEKEEWTPA AVIVLLEAYE ERLGEVNNGN  120
LKAKDWEEVA TLVNRHCQGT RSIVGVKQCK RKVYALRRWY RTIRTRQAPY RPVGYEVNVL  180
MVLDRIMTPY PYQAGIPGGI DAGERLSFPT PSSFDEEEDL PAAEQGHGFG GCVTPQLGKR  240
QRNPAEGNPV IAAIPLPPKS ARGSGSGNGA ARKKAARKGF WGPGEEVATA LKGFAKVLTQ  300
IEVAKKNIMK DLDVRRSELQ LKLAAFKPYP EDGPPKAPQQ PQVI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.24e-14Trihelix family protein